{ "_id": "6a181e46acfb0bcc41db19cc", "Package": "polySegratio", "Type": "Package", "Title": "Simulate and Test Marker Dosage for Dominant Markers in\nAutopolyploids", "Version": "0.2-6", "Date": "2026-02-25", "Authors@R": "c(\nperson(given = \"Peter\",\nfamily = \"Baker\",\nrole = c(\"aut\", \"cre\"),\nemail = \"drpetebaker@gmail.com\",\ncomment = c(ORCID = \"0000-0002-1241-7263\")))", "Description": "Perform classic chi-squared tests and Ripol et al(1999)\nbinomial confidence interval approach for autopolyploid\ndominant markers. Also, dominant markers may be generated for\nfamilies of offspring where either one or both of the parents\npossess the marker. Missing values and misclassified markers\nmay be generated at random.", "URL": "https://github.com/petebaker/polysegratio", "BugReports": "https://github.com/petebaker/polysegratio/issues", "License": "GPL-3", "VignetteBuilder": "knitr", "Repository": "https://petebaker.r-universe.dev", "Date/Publication": "2026-02-26 23:44:29 UTC", "RemoteUrl": "https://github.com/petebaker/polysegratio", "RemoteRef": "HEAD", "RemoteSha": "ad238575594d7ceb951a84aed66ff8eacea4b2c1", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-28 10:48:46 UTC", "User": "root" }, "Author": "Peter Baker [aut, cre] (ORCID: )", "Maintainer": "Peter Baker ", "MD5sum": "b109f199e33549a62b9cda47de607f01", "_user": "petebaker", "_type": "src", "_file": "polySegratio_0.2-6.tar.gz", "_fileid": "4bb99948b43c75e878998d0695b181729ad0a4832a405f4e91009020782d5e0a", "_filesize": 430298, "_sha256": "4bb99948b43c75e878998d0695b181729ad0a4832a405f4e91009020782d5e0a", "_created": "2026-05-28T10:48:46.000Z", "_published": 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where blanks in first column are replaced by preceding non-blank label", "topics": [ "makeLabel" ] }, { "page": "plot.segRatio", "title": "Plot segregation ratios for either observed or simulated marker data", "concept": [ "segregation ratio", "dominant marker", "autopolyploid" ], "topics": [ "plot.segRatio", "plot.simAutoCross", "plot.simAutoMarkers" ] }, { "page": "print.segRatio", "title": "Print segregation ratios", "concept": [ "segregation ratio", "dominant marker", "autopolyploid" ], "topics": [ "print.segRatio" ] }, { "page": "print.simAutoMarkers", "title": "Print objects of class simAutoMarkers", "concept": [ "segregation ratio", "dominant marker", "autopolyploid", "polyploid" ], "topics": [ "print.divideAutoMarkers", "print.simAutoCross", "print.simAutoMarkers" ] }, { "page": "print.testSegRatio", "title": "Print objects of class testSegRatio", "concept": [ "segregation ratio", "dominant marker", "autopolyploid", "polyploid" ], "topics": [ "print.testSegRatio" ] }, { "page": "segRatio", "title": "S3 class segRatio", "topics": [ "segRatio" ] }, { "page": "segregationRatios", "title": "Compute observed segregation proportions for dominant markers in autopolyploids", "concept": [ "segregation ratio" ], "topics": [ "segregationRatios" ] }, { "page": "sim.autoCross", "title": "Simulate dominant markers for an autopolyploid cross for all parental types", "concept": [ "segregation ratio", "dominant marker", "autopolyploid", "polyploid" ], "topics": [ "sim.autoCross" ] }, { "page": "sim.autoMarkers", "title": "Simulates dominant markers from an autopolyploid cross", "concept": [ "segregation ratio", "dominant marker", "autopolyploid" ], "topics": [ "sim.autoMarkers" ] }, { "page": "simAutoCross", "title": "S3 class simAutoCross", "concept": [ "segregation ratio", "dominant marker", "autopolyploid", "polyploid" ], "topics": [ "simAutoCross" ] }, { "page": "simAutoMarkers", "title": "S3 class simAutoMarkers", "concept": [ "segregation ratio", "dominant marker", 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