Package: polySegratio 0.2-5

polySegratio: Simulate and Test Marker Dosage for Dominant Markers in Autopolyploids

Perform classic chi-squared tests and Ripol et al(1999) binomial confidence interval approach for autopolyploid dominant markers. Also, dominant markers may be generated for families of offspring where either one or both of the parents possess the marker. Missing values and misclassified markers may be generated at random.

Authors:Peter Baker [aut, cre]

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polySegratio.pdf |polySegratio.html
polySegratio/json (API)

# Install 'polySegratio' in R:
install.packages('polySegratio', repos = c('https://petebaker.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/petebaker/polysegratio/issues

On CRAN:

18 exports 0.93 score 2 dependencies 1 dependents 24 scripts 191 downloads

Last updated 6 years agofrom:fc816194d7. Checks:OK: 3 NOTE: 4. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 24 2024
R-4.5-winNOTEAug 24 2024
R-4.5-linuxNOTEAug 24 2024
R-4.4-winNOTEAug 24 2024
R-4.4-macNOTEAug 24 2024
R-4.3-winOKAug 24 2024
R-4.3-macOKAug 24 2024

Exports:addMisclassaddMissingautoFilldivide.autoMarkersexpected.segRatiomakeLabelplot.segRatioplot.simAutoCrossplot.simAutoMarkersprint.divideAutoMarkersprint.segRatioprint.simAutoCrossprint.simAutoMarkersprint.testSegRatiosegregationRatiossim.autoCrosssim.autoMarkerstest.segRatio

Dependencies:gdatagtools

polySegratio

Rendered frompolySegratio-overview.Rnwusingutils::Sweaveon Aug 24 2024.

Last update: 2014-02-06
Started: 2014-02-06